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Biological Conservation

Elsevier BV

Preprints posted in the last 90 days, ranked by how well they match Biological Conservation's content profile, based on 46 papers previously published here. The average preprint has a 0.04% match score for this journal, so anything above that is already an above-average fit.

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What we miss shapes what we protect: sea turtles as a case study of grey literature and language bias in an evidence synthesis

Heng, H. W. K.; Buenafe, K. C. V.; Restrepo, J.; Nisthar, D.; Amano, T.; Pilcher, N.; Chu, T. C.; Trong, D. N.; Ellis Arnett, R.; Fong, C.-L.; Herandarudewi, S. M. C.; Hoh, D. Z.; Long, S. L.; Ng, C. K. Y.; Panyawai, J.; Dunn, D. C.

2026-07-20 ecology 10.64898/2026.07.17.739284 medRxiv
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Evidence-based approaches are increasingly advocated and applied in conservation to provide reliable recommendations for management and policymaking. Although substantial efforts have been undertaken to generate ecological knowledge across languages and publication types, many syntheses and meta-analyses fail to include relevant literature sources; drawing into question their reliability. To assess the extent of biases resulting from ignoring grey literature and non-English publications, we reviewed and synthesised movement and migratory connectivity data for green turtles across Southeast Asia from multiple literature types and eight languages. We identified substantial losses in connectivity information, with at least half of all locations losing more than 88% of their connections, and shifts in demographic representation and sampling techniques when grey literature was excluded from the evidence base. The exclusion of non-English literature had a comparatively smaller impact. The regional connectivity network generated through this study highlights the need for holistic reviews to develop evidence bases to underpin transboundary management of migratory species. Ignoring grey literature and, potentially, regional languages in the development may lead to misallocation of limited management resources. Holistic reviews can further support the establishment of Important Areas for migratory species and inform how we meet and report on global biodiversity commitments.

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The knowledge landscape of jaguar science: rapid growth, thematic structure, and regional inequalities

Elias, M. A. M.; Soares, P. T.; Diniz-Filho, J. A. F.; de Almeida Jacomo, A. T.; Silveira, T. J.; Silveira, L.

2026-08-21 ecology 10.64898/2026.08.17.745206 medRxiv
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Understanding how scientific effort is distributed is essential for evaluating the evidence available to guide species conservation. We assessed the temporal, thematic, methodological, and spatial organization of jaguar (Panthera onca) research across the species range. Using 1,028 bibliographic records, we applied a metadata-based scope filter, defining a primary analytical corpus of 857 articles and an inclusive sensitivity corpus of 989. We analyzed publication growth from 1946-2024, author-keyword networks, high-specificity research-domain and methodological indicators, article-based spatial concentration across nine regions, and anthropogenic context using the Human Impact Index. Publication output increased strongly and nonlinearly, with the negative-binomial generalized additive model explaining 96% of deviance. Population and abundance, human-wildlife conflict and coexistence, and movement and connectivity were the most frequent research domains, whereas camera trapping was the most frequent methodological approach. Spatial analyses included 237 georeferenced terrestrial articles. Research was strongly concentrated in the Pantanal, Mesoamerica, and Atlantic Forest, but was underrepresented relative to range area in the Andes and Choco-Darien, Amazon, and Guiana Shield. These patterns were stable to the broader scope definition. Research concentration showed no strong association with region-wide anthropogenic pressure, although studies within several extensive regions tended to occur in more human-influenced portions than the regional average. Jaguar research therefore shows substantial growth and partial alignment with applied conservation challenges but remains geographically uneven. Expanding representative research in underrepresented regions, while maintaining work in threatened landscapes, would strengthen the evidence base for range-wide conservation planning and improve coordination among countries, institutions, and regional research traditions.

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Biodiversity knowledge and conservation shortfalls in Rivulidae fishes

Costa, J. H. A. d.; Guedes, G. H. S.

2026-07-06 ecology 10.64898/2026.07.04.736495 medRxiv
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The biodiversity crisis is exacerbated by persistent gaps in taxonomic, geographic, and conservation knowledge. This study provides a comprehensive assessment of Linnean, Wallacean, and conservation shortfalls in Rivulidae (Cyprinodontiformes), one of the most diverse families of Neotropical freshwater fishes. To this end, an extensive dataset was compiled, comprising 494 valid species, 51 synonyms, 3,419 occurrence records, and information on life cycle, distribution, and conservation status. The Linnean shortfall remains open: after 1975, the rate of species description increased sharply, and estimates indicate that 103 species remain undescribed (95% CI: 53-212). The year of species description was influenced by detectability and accessibility factors, with larger species, more widely distributed species, and species occurring in more densely populated areas being described earlier. The Wallacean shortfall was broad and spatially uneven: only 5.34% of the region was considered adequately sampled. The conservation shortfall was also substantial: 179 species are threatened with extinction, 69 species remain Not Evaluated, and 62 are Data Deficient. The mean time between taxonomic description and first IUCN extinction-risk assessment was 25.7 years. Moreover, 59.9% of species have no records within protected areas, including 69.3% of threatened species. These findings synthesize an urgent challenge: biodiversity knowledge and conservation shortfalls must be overcome simultaneously to protect species that are still being discovered, remain poorly documented spatially, and are restricted to habitats under intense anthropogenic pressure. The conservation of Rivulidae cannot wait for complete knowledge; action amid uncertainty is necessary to prevent both known and unknown species from disappearing.

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Impact of Amazonian protected areas in preventing deforestation and carbon loss over four decades

Lopes Dias, L.; Ribas, L. G. d. S.; Ribeiro, B. R.; Geldmann, J.; Prado, F.; Soares, N.; De Marco, P.

2026-06-23 ecology 10.64898/2026.06.23.733928 medRxiv
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Native vegetation protection is a key strategy for delivering both biodiversity and climate benefits, and protected areas have been widely adopted to keep tropical biomes standing. Yet deforestation is driven by interrelated environmental and social factors, and the effectiveness of protected areas varies considerably across space. Here, we evaluated the impact of 802 protected and conserved areas in the Brazilian Amazon on preventing vegetation loss and avoiding carbon emissions over the past 40 years using statistical matching to address the location bias of protection. We found that protected areas were effective throughout the study period, reducing the probability of deforestation per km2 by an average of 0.5 percentage points per year. While the Amazon biome lost 14% of its native vegetation between 1986 and 2024, protected areas prevented the deforestation of 290,436 km2, nine times their actual internal loss. They also stored 45,336 Mt of carbon in 2016 (61% of the Amazon stock) and prevented the emission of 7,300 Mt of CO2 by 2024. Deforestation inside the areas and remoteness reduced their impact, while areas that were initially more preserved were more effective. Area size and age had no influence over impact once we analyzed the amount of avoided deforestation per size and age. Impact also varied across Brazilian states, highlighting the role of regional context. All three protection categories (conservation units, indigenous lands, and quilombola territories) showed a positive mean impact, indicating that each, in aggregate, contributes to reducing deforestation. These findings provide robust evidence of the substantial role of Amazonian protected areas in habitat conservation and climate mitigation, while underscoring that this contribution remains undervalued. We advocate for strategically expanding protection to areas of greatest potential impact, and for securing adequate funding to ensure protected areas can fulfill that potential.

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The devil in citizen science data: observation processes invalidate the causal inference that photovoltaic policy reduces bird diversity

Chen, Y.; Zhang, W.; Zou, H.-X.; Shi, X.; Liu, Y.

2026-08-27 ecology 10.64898/2026.08.25.746390 medRxiv
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Citizen science data are increasingly used to infer biodiversity change, but causal claims based on such data are credible only if sampling effort and its temporal shifts are explicitly modeled. Zhang et al. (1) used citizen science data to conclude that greater photovoltaic policy stringency, measured using the photovoltaic policy stringency index (PSI), reduced county-level bird diversity in China. We reproduced their fixed effects and instrumental variable estimates. However, the observed Shannon diversity derived from pooled citizen science records reflects both bird communities and sampling effort, which the authors' controls do not adequately capture. Accounting for observer count changed the reported statistically significant 2.10% decline in Shannon index to a nonsignificant 0.58% increase (P = 0.288) per one-standard-deviation increase in PSI, and rendered the instrumental variable estimate statistically indistinguishable from zero (P = 0.912). Yet observer count is only one of many sources of sampling bias. PSI was also associated with multiple dimensions of sampling effort, consistent with sampling effort acting as a potential mediator in the PSI-diversity chain. The sampling domain also shifted markedly from 2014 to 2023: recorded county-months increased almost 24-fold, median observer count rose from one to three, and zero-duration records declined from 57.2% to 0.17%. Without adequate adjustment, these shifts confound estimates of temporal change in observed bird diversity. Beyond its inadequate treatment of sampling effort, the original study also misinterpreted its statistical results. Although the reported R{superscript 2} values are high, they are dominated by county and year-month fixed effects, with PSI contributing a partial R{superscript 2} of only 0.048% on observed Shannon index. The PSI-photovoltaic-area correlation is also weak (r = 0.0414) and vanishes after accounting for fixed effects (P = 0.977). Furthermore, the released bird observation data contain many erroneous outliers, raising significant concerns about insufficiently rigorous data preprocessing and quality control. These results show that the released data cannot properly distinguish ecological change from sampling effort change. Robust inference from citizen science data requires checklist-level effort metadata, explicit correction for spatiotemporal sampling shifts, and close collaboration among researchers with complementary methodological and ecological expertise.

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Snow leopard-mediated apparent competition between wild ungulates and domestic livestock in the Trans-Himalaya

Bajaj, D.; Khanyari, M.; Jaggi, H.; Chhering, T.; Chunit, K.; Gurmet, K.; Thinley, T.; Thuktan, T.; Tobge, R.; Sharma, D.; Mishra, C.; Sharma, R. K.; Suryawanshi, K.

2026-08-06 ecology 10.64898/2026.08.05.742978 medRxiv
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Across High Asia, snow leopards Panthera uncia share habitats with pastoralists and consume both wild and domestic herbivores. Increasing wild prey is vital for predator conservation, but its effect on livestock depredation is unclear: it could decrease depredation through apparent facilitation or increase it through apparent competition. We investigated this association using a 13-year time series dataset from Upper Spiti Landscape in the Indian Trans-Himalaya. Long-term data on elusive carnivores are rare, making this time series especially valuable for testing predator-mediated interactions. We found higher wild ungulate density was accompanied by significantly greater depredation of free-ranging livestock, and this association remained positive after bootstrapping to account for uncertainty in density estimates. These results suggest snow leopard-mediated apparent competition between wild and domestic herbivores. We recommend conservation efforts that increase wild prey must also integrate effective livestock protection and support strategies to enhance coexistence between predators, prey and pastoralists.

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Blockages to biodiversity data access for conservation and sustainability management

Stephenson, P. J.; Unter, K. M. M.; Walls, J. L.; Moncada, J. A. A.; Sawyerr, L.; Londono Murcia, M. C.; Ntiamoa-Baidu, Y.; Fumagalli, L.

2026-06-16 ecology 10.64898/2026.06.13.732021 medRxiv
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Governments, civil society organizations and businesses often lack the biodiversity data they need for decision-making and adaptive management, impacting their planning, reporting and performance. We explored the biodiversity data needs of such actors in Colombia, Ghana and Switzerland to identify factors affecting data availability and use. Responses to questionnaire surveys showed that the data types with the biggest gaps between user needs and access were progress on conservation or sustainability actions, species populations, habitat state and ecological risk. The most frequent data blockages related to inadequate resources and organizational capacity. Obstacles significantly associated with a lack of primary data included an absence of organizational biodiversity goals and monitoring systems. Problems accessing habitat quality and species abundance data were associated with data collection methods being unknown or unavailable. Businesses were more likely than other groups to need data on threats, perhaps reflecting the increasing importance of environmental risk to the corporate sector. Businesses are less likely to collect primary data or use secondary data and are significantly more likely to be unclear on what biodiversity indicators to use. Non-business organizations are significantly more likely to be unable to access data because of a lack of funding for data collection, analysis, and use. Our results highlight the need for stakeholders across sectors to work together to find common solutions to build and invest in monitoring capacity that unblocks the flow of biodiversity data.

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Birds protected in Europe, overlooked in Africa: conservation synergies between African primates and wintering Afro-Palearctic migratory birds

Kiribou, I. A. R.; Mucyo, J. P. S.; Kazaba, P. K.; Kamga, S. M.; Kuehl, H. S.; Junker, J.; Sasse, T.; Heinicke, S.

2026-07-21 ecology 10.64898/2026.07.20.739569 medRxiv
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Primates are frequent targets of international conservation efforts, due to their anthropological significance and function as biodiversity conservation flagship species. Afro-Palearctic migratory birds receive considerable conservation attention in their breeding habitats, but much less in their wintering areas. Good wintering habitat conditions are, however, crucial for long-term population viability. Integrating complementary conservation efforts for these taxa may provide substantial co-benefits. Here, we evaluate the spatial, ecological, and conservation congruence between 248 Afro-Palearctic migratory bird and 213 African primate species to identify potential synergies in intercontinental conservation efforts. The wintering areas of 218 migratory bird species overlap with primate ranges. Up to 125 Afro-Palearctic migratory bird species co-occur with at least one primate species locally and highest regional cross-taxon richness occurs in forest-savanna ecotones in West Africa and eastern DRC. Agriculture and hunting threaten both taxa (88-97% of primate and 59-70% of bird species). Several conservation interventions have demonstrated effectiveness for both taxa, particularly habitat protection and hunting reduction. We propose three policy priorities: strengthening cross-taxa monitoring within existing primate research infrastructure, improving the conservation evidence base in the African context, and creating financing synergies that allow conservation investments to simultaneously benefit both taxa.

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How well is Italian biodiversity represented in red lists and conservation legislation? Taxonomic biases, coverage gaps and the assessment-to-legislation bottleneck

Miccolis, E.; Rasotto, M. B.; De Pascale, F.; Pievani, T.

2026-07-01 ecology 10.64898/2026.06.30.730850 medRxiv
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Italy, one of Europe's most biodiverse countries, is expected to undergo landscape-wide nature recovery thanks to the EU Nature Restoration Regulation. National red lists represent critical instruments for informing conservation strategies at finer geographic resolutions and prioritizing taxa of national importance; yet the taxonomic completeness of Italian red lists remains unquantified in relation to national biodiversity. Equally, no systematic evaluation has been conducted on the representation of threatened and endemic Italian taxa within European and international conservation directives and treaties. We present the first comprehensive review of threat status and policy inclusion of Italian biodiversity, encompassing animals, plants, fungi, lichens, and algae. We cross-referenced national species checklists with Italian, European, Mediterranean, and global IUCN red lists, alongside policy annexes from the Birds and Habitats Directives, the Bern and Barcelona Conventions, and CITES. Our dataset comprised 76,845 taxa, of which 8,389 are endemic; yet red list assessments exist for only 10% of this total (7,349 taxa, including 1,700 endemics). Conservation policy coverage is even more restrictive: only 1,346 taxa are listed under at least one legislative instrument, with only half of these classified as threatened. This constitutes a compounding double bottleneck with most of the Italian biodiversity remaining both unassessed and unprotected and systematically biasing conservation policy toward an unrepresentative fraction of national biodiversity. We recommend accelerated national assessments and urgent establishment of a national biodiversity priority list founded on transparent prioritization protocols. This would complement ecosystem-based interventions mandated by the Nature Restoration Regulation while correcting for vertebrate-centred biases.

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Rapid population decline of Egyptian fruit bats on Cyprus

Dechmann, D. K. N.; Akre, K. L.; de Wit, L. A.; Kafkaletou Diez, A. G. G.; Mandl, I.; Makridou, Z.; Michael, K.; O'Mara, M. T.; Papastylianou, K.; Wikelski, M.; Frick, W. F.

2026-06-08 ecology 10.64898/2026.06.05.728241 medRxiv
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Preventing extirpations requires timely detection of rapid declines and immediate conservation response. Egyptian fruit bats (Rousettus aegyptiacus) are globally listed as Least Concern, but their genetically isolated population in Cyprus is Critically Endangered. We document a severe ongoing decline of the Cypriot R. aegyptiacus population observed during standardized counts at major roost sites. April 2024 counts at four principal roosts recorded 4633 bats. Surveys in December 2025 documented 554 individuals across the same sites. April 2026 counts revealed a 90.1% decline since April 2024. Additionally, we found numerous dead bats at three roosts, and residents across the island reported dead bats, suggesting an acute mortality event beginning in early 2025. The cause remains unknown. Given the magnitude and pace of decline, this population potentially faces imminent extirpation. We recommend immediate action to protect roosting and foraging habitat, along with coordinated diagnostics, expedited research permits, standardized monitoring, and technical collaboration to identify and mitigate underlying causes of high mortality.

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Continent-wide calibration of camera-trap metrics reveals low population densities in the European wildcat

Nogueira, C.; Alves, B. S. G.; Anile, S.; Barona, J.; Bastianelli, M. L.; Burgos, T.; Catello, M.; Curveira-Santos, G.; Diaz-Ruiz, F.; Federico, P.; Fiderer, C.; Flezar, U.; Gerngross, P.; Gil-Sanchez, J. M.; Henrich, M.; Hernandez-Hernandez, J.; Heurich, M.; Krofel, M.; Maronde, L.; Matias, G.; Moeller, A. K.; Molinari-Jobin, A.; Peters, A.; Port, M.; Premier, J.; Rocha, F.; Sanchez-Cerda, M.; Sayol, F.; Vilella, M.; Virgos, E.; Zimmermann, F.; Ferreras, P.; Jimenez, J.; Monterroso, P.

2026-07-07 ecology 10.64898/2026.07.06.734798 medRxiv
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Effective conservation depends on demographic metrics that reliably reflect species status, particularly population abundance. For elusive species occurring at low densities, however, such metrics remain difficult to obtain. Spatial capture-recapture (SCR) models are the standardized approach for estimating density in marked populations, but their data requirements, especially the need for multiple spatial recaptures across individuals, often limit applicability in small or data-poor populations. This constraint has resulted in knowledge gaps for some of the most vulnerable species, undermining evidence-based conservation planning and management. Using camera-trap data and SCR-derived density estimates from data-rich populations, we evaluated alternative, less data-demanding metrics and tested the hypothesis: Space to Event (STE), Mean Local Abundance (MLA), and Relative Abundance Index (RAI) exhibit predictable relationships with SCR-derived density; if supported, these metrics can reliably estimate density in populations where SCR models cannot be implemented. We applied this framework to the European wildcat (Felis silvestris), an elusive small felid with highly fragmented populations across Europe, for which density estimates are largely lacking despite growing conservation concern. Across 21 study areas spanning most of the species' range, our results indicate that European wildcats generally occur at lower densities than previously reported. SCR-derived estimates (n=10) averaged 10.32 {+/-} 11.56 inds/100km2, while STE enabled density estimation in five additional data-poor areas (mean 5.52 {+/-} 5.33 inds/100km2). STE showed a strong linear relationship with SCR-derived density (R2=0.98), supporting its use as a viable alternative when SCR is infeasible, although it tended to underestimate compared to SCR, especially at higher densities. In contrast, MLA and RAI showed weaker and non-linear relationships with SCR-derived density (R2=0.65), indicating substantially lower explanatory power and suggesting their estimates are more strongly influenced by confounding processes. By explicitly calibrating alternative metrics across a wide density gradient throughout most of the species' distribution, this study provides a transferable methodological framework for estimating density in low-density wildlife populations and the first continent-wide, standardized density assessment of a carnivore species. From a management perspective, our findings identify populations that may be most vulnerable, particularly those with the lowest densities, and highlight the need to prioritize absolute abundance monitoring.

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Matching lynx population estimates to management scale: conservation science vs politics in the western Swiss Alps

Verschueren, S.; Braunisch, V.; Debons, V.; Arlettaz, R.

2026-08-26 ecology 10.64898/2026.08.25.747176 medRxiv
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Reliable population estimates are essential for wildlife management, yet monitoring schemes often do not match the administrative scale at which decisions are made. We illustrate this challenge using the Eurasian lynx in the canton of Valais, Switzerland, where official state monitoring is fragmented across three reference areas surveyed in different years. We analyzed three winters (2023-2026) of independent, canton-wide camera trap data, recording 899 independent lynx captures (27, 31 and 34 adults per winter). Lynx distribution and reproduction concentrated in the Northwest and connected to the thriving Pre-alpine populations. Density modelling for 2025/2026 estimated 37 independent lynx (95% CI: 26-52) on the whole cantonal territory, corresponding to a density of 1.09 (0.77-1.56) individuals per 100 km2. These estimates are substantially below the figures improperly extrapolated from a cross-cantonal reference area and conveyed by political authorities. Future lynx management decisions should be rooted in scientifically sound, scale-relevant information.

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There is no silver bullet: Tiger corridors do not ensure multispecies carnivore connectivity

Rana, D.; Ramakrishnan, U.

2026-07-06 ecology 10.64898/2026.07.05.736645 medRxiv
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Connectivity is critical to sustaining endangered carnivores in speciose yet fragmented landscapes such as in the global south. Corridors to mitigate fragmentation are designed based on charismatic species or habitat-based approaches, but their multispecies effectiveness for maintaining functional connectivity remains poorly tested. We combined landscape genetic analyses across five sympatric carnivores - Panthera tigris, Panthera pardus, Prionailurus viverrinus, Felis chaus, and Melursus ursinus, to evaluate how landscape features shape functional connectivity in a globally important felid landscape. We then assessed the efficiency of existing tiger corridors and single-species surrogates for maintaining multispecies functional connectivity. Species exhibited contrasting responses to landscape variables, producing distinct resistance surfaces and connectivity corridors. Spatial similarity of connectivity between species pairs was highly variable (r = 0.14-0.93), but no single species effectively captured connectivity patterns of the broader carnivore community (maximum mean overlap of <0.7 across species). Moreover, genetically optimized corridors were at least 70% more efficient in capturing connectivity compared to existing tiger corridors, demonstrating mismatches between structural and functional connectivity. Our results highlight limitations of surrogate-based corridor planning and demonstrate that integrating multispecies functional connectivity can substantially improve conservation planning in human-dominated landscapes.

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One scale does not fit all: invasive predator identity determines the impact on native prey

Bonet Bigata, A.; Sutherland, C.; Lambin, X.

2026-06-27 ecology 10.64898/2026.06.26.734748 medRxiv
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O_LIWhen eradication is unfeasible, invasive predator control should evaluate how removal affects ecological responses by native species. Assessments often use total invasive predator abundance to evaluate prey responses, yet intraspecific variation in diet and space use means that some subgroups cause disproportionate impacts. Identifying these problem individuals, and the spatial scales over which their impacts operate, can enable targeted spatially explicit removal to maximise impact reduction. However, despite individual-level information is often already collected during trapping operations it is seldom included when analysing predator impacts, potentially biasing the conservation outcomes expected under blanket removal. C_LIO_LIWe use a novel framework and two decades of invasive predator control data to estimate how individual variation in residency status influences the distance-dependent impacts of invasive American mink Neogale vison on water vole Arvicola amphibius occupancy across two prey surveys. We also develop a sub-model to predict mink residency status for individuals with missing age data. C_LIO_LIThe probability of capturing adult mink decreased with elevation and years of control, indicating that long-term control altered the resident population and demographic composition of mink around water vole sites. C_LIO_LIDistance-dependent negative impacts of mink varied by residency status, becoming negligible at approximately 20 km from water vole sites for resident mink and 2 km for transient. The spatial scale of mink impacts was largest during the first vole survey when resident mink were more abundant, and declined rapidly for the second survey, when mink were less abundant and spatially clustered. Our results suggest that water voles have benefited mostly from reducing resident mink rather than the total population, especially in early control phases. C_LIO_LIManagers can use our framework to develop spatially explicit and impact-based strategies, not restricted to invasive species control, to construct empirically informed management buffers around populations of conservation concern. Long-term efforts will change the landscape and invasive predator contexts, and thus we recommend iteratively updating and re-evaluating management outcome evaluations. We argue that incorporating individual heterogeneity improves our understanding of ecological mechanisms influencing management success but that the suitability of targeted strategies should be evaluated for target socioecological contexts. C_LI

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Biodiversity material remains where capacity and governance are strong, but taxonomic resources concentrate with geopolitical power

Moura, M. R.; Silva, R. H. P.; Pedrozo, M.; Guedes, J. J. M.; Uetz, P.; Moroti, M. d. T.

2026-06-25 ecology 10.64898/2026.06.23.734087 medRxiv
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AimBiodiversity-rich regions often lack the scientific infrastructure needed to document and curate their own biodiversity, creating inequalities in access to taxonomic reference material. We investigated how biological, institutional, and geopolitical factors shape the retention, extraction, and appropriation of reptile holotypes, the name-bearing specimens upon which species descriptions are based. LocationGlobal. TaxonReptiles. MethodsWe compiled a historical dataset of reptile holotype origins and destinations spanning 1758-2024 to reconstruct long-term patterns of retention and international specimen flows. We then quantified species-level holotype retention, holotype flows between country pairs, and country-level patterns of retention, appropriation, and network centrality for the period 1990-2024, and used generalised linear mixed models to assess the biological, institutional, and geopolitical determinants of these contemporary circulation processes. ResultsAlthough nearly 90% of reptile species described originated in the Global South, less than a quarter of their holotypes remain housed there. Historically, exported holotypes consistently outnumbered retained holotypes on a decadal basis until the early twenty-first century. Retention was promoted by local scientific capacity, institutional infrastructure, collector involvement in species descriptions, and environmental governance. In contrast, extraction was concentrated in highly endemic regions with limited scientific infrastructure and was associated with taxonomic revisions, socioeconomic interest, and disparities in political stability and colonial history. Appropriation of foreign holotypes was greatest in countries with high research investment, strong environmental governance, and historical geopolitical influence. Main conclusionsGlobal patterns of holotype circulation reflect a persistent geography of scientific inequality. The distribution of taxonomic reference material emerges from the interaction of retention, extraction, and appropriation processes, linking local biodiversity discovery to uneven global scientific capacity. Reducing these inequalities will require investments in taxonomic expertise, institutional infrastructure, and governance frameworks that promote more equitable stewardship of biodiversity knowledge and its material foundations.

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Ecological dynamics and stability in the Taï and Comoe national parks in Cote dIvoire

Kouakou, J.-L.; Assemien Cyrille-Joseph, A.; Alphonse, Y. K.; Ouattara, A.; Diarrassouba, A.; Gonedele-Bi, S.

2026-08-20 ecology 10.64898/2026.08.12.744377 medRxiv
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The accelerated loss of biodiversity in sub-Saharan Africa threatens the functioning of tropical ecosystems. In Cote dIvoire, the Comoe National Park (PNCOMOE), a Sudano-Guinean savannah, and the Tai National Park (PNTAI), a dense rainforest, both UNESCO World Heritage Sites, are home to fauna assemblages of global importance, whose long-term resilience remains insufficiently quantified. This study assesses and compares, over a decade (2014-2025), the functional stability of vertebrate communities in these two contrasting ecosystems, using nine metrics covering resistance, invariance, persistence, interspecific synchrony, Tilmans stability, Jacobian resilience and a Composite Stability Index (CSI). Abundance data for 107 vertebrate species were collected via foot transects at PNTAI and aerial surveys at PNCOMOE. The stability metrics were calculated using the R package estar, integrated with an alpha diversity analysis (Shannon H', species richness S, Pielous evenness J') and a Jacobian spectral analysis within a multidimensional ecological assessment. PNTAI (0.708) exhibits significantly higher alpha diversity (H' = 2.82; S = 55.7 taxa) and community resilience 4.6 times higher than in the PNCOMOE (0.153). Its interspecific asynchrony index (0.504) reveals a strong portfolio effect, absent in the PNCOMOE (0.232). In contrast, PNCOMOE exhibits higher temporal invariance (0.382 versus 0.116) and Tilman stability (0.276 versus 0.152), reflecting more predictable dynamics. The overall ICS favours the PNTAI (0.484) and (0.370). The Jacobian analysis detects local instability in both parks (Re({lambda}max) = 5.58 at the PNTAI; 3.73 at the PNCOMOE). The two parks exhibit distinct yet complementary stability architectures: PNTAI relies on dynamic stability based on resilience and interspecific compensation, whilst PNCOMOE demonstrates conservative stability through temporal regularity. The absence of calculable resilience at PNCOMOE suggests a potential crossing of a functional degradation threshold, arguing for urgent restoration interventions and differentiated conservation strategies, tailored to the resilience mechanisms specific to each ecosystem.

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Conservation of declining Florida ecosystems is critical for an at-risk butterfly

Johnson, A.; Walsh, R. L.; Foquet, B.; Daniels, J. C.; Guralnick, R. P.; Kawahara, A. Y.

2026-08-05 ecology 10.64898/2026.08.04.742755 medRxiv
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Assessing the availability of protected habitats for at-risk species is needed to determine how the spatial distribution of land cover and land use shapes conservation outcomes. The Loammi skipper (Atrytonopsis loammi) is a nonmigratory, prairie-associated butterfly that has experienced a significant reduction in its formerly widespread southeastern United States distribution over the past several decades. Observations in recent years have been limited to a small number of isolated Florida populations, and it is unclear how much suitable habitat remains and what proportion of that habitat is protected. Here we used publicly available community science data and collected specimens to identify the predominant land cover types occupied by A. loammi. We then quantified the extent to which each of these land cover types overlap with protected areas to estimate the proportion of the butterflys current distribution that occurs on managed conservation lands. Our findings show that A. loammi relies heavily on protected lands, with over half of the total area of the most strongly associated habitats located within protected areas. Given the continued expansion of human-modified landscapes in Florida and the reliance of A. loammi on protected lands, the long-term persistence of A. loammi will likely depend on the conservation and effective management of its remaining suitable habitat. Implications for insect conservationOur results highlight the critical role of protected areas in sustaining at-risk insect populations, particularly for species with limited dispersal and shrinking ranges. More broadly, they suggest that conserving and restoring protected habitats while maintaining connectivity are essential strategies for effective insect conservation in rapidly developing regions.

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Roadkill is a crucial factor in the population decline of migratory monarch butterflies

Momeni-Dehaghi, I.; Fahrig, L.; Mitchell, G. W.; Rytwinski, T.; Hanson, J. O.; Bennett, J. R.

2026-07-30 ecology 10.1101/2024.09.27.615542 medRxiv
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The charismatic migratory monarch butterfly population has declined dramatically, likely precipitated by loss of its breeding host plants (milkweed). Whether restoring milkweed would allow monarch recovery depends on whether additional factors currently limit the population. We investigated road mortality as one such factor. Monarchs cross thousands of roads during fall migration, and traffic volume has increased sharply while the population has plummeted. Using estimates of pre-migration distribution, flight patterns, and road traffic, we estimate that at least 61% (range 61% to 99.99%) of migrating monarchs are road-killed each fall. Although there is high uncertainty in our estimate, its magnitude suggests that roadkill could inhibit recovery of the population. Recovery planning should not only consider increasing the monarchs host plants, but must also address the reality of roadkill.

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Effects of gamebird release on the non-gamebird dietary diversity and composition of red foxes (Vulpes vulpes) in Southern England

Pedersen, S.; Sage, R. B.; Woodburn, M. I. A.; Coomes, J. R.; Werling, J.; Tyler, C. R.

2026-08-21 ecology 10.64898/2026.08.20.745779 medRxiv
Top 0.1%
6.8%
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The red fox, Vulpes vulpes, is abundant in England and can exert limiting effects on their avian and mammalian prey. Large-scale gamebird releases in the UK may be sustaining high predator numbers, leading to greater predation on other prey species, especially once gamebird stocks are depleted. However, little is known how gamebird release affects the broader diet of the red fox. Here we used DNA metabarcoding to assess the diet of foxes from 18 agricultural estates in Southern England, 10 of which released large numbers of gamebirds (red-legged partridges - Alectoris rufus, and common pheasants - Phasianus colchicus) and 8 which did not. Scats were collected over one year, allowing for seasonal investigation of the foxes' diet. We investigated the vertebrate species consumed and compared the non-gamebird dietary diversity and composition between release and non-release estates and across seasons. The field vole (Microtus agrestis) was found to be the most frequently predated species overall. Brown hares and field voles were detected more on release sites, while bank voles and dog faeces were detected more on non-release sites. We found little evidence that foxes predate ground nesting birds or other species of concern. The dietary diversity was significantly lower on estates that released gamebirds, and this difference was most notable during the post-shoot, spring months (February to April). On both estate types, diversity was highest in the summer months. The altered predatory behaviour due to gamebird release is likely to affect the populations of the non-game prey of the red fox and this should be considered when designing policies regarding gamebird management and biodiversity conservation. Alternative predation combined with predator control may be reducing predation pressure on non-game prey where gamebirds are released, but high fox density elsewhere likely results in higher predation pressure on a wide range of species.

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Fishery Cooperatives as Institutional Intermediaries in Fragile Contexts: Assessing Social-Ecological Resilience in South-Central Somalia

Madar, A. A.; Hadaaf, O. H.

2026-07-28 ecology 10.64898/2026.07.25.740677 medRxiv
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6.4%
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Small-scale fisheries provide essential coastal livelihoods in developing regions, yet they often confront severe institutional voids within fragile-state contexts. Adopting a social-ecological systems framework, this study addresses three sequential objectives: characterizing the contemporary institutional and demographic status of fishery cooperatives across the five South-Central Federal Member States in comparison to their late-1980s historical peak; ranking the socio-economic, infrastructural, regulatory, and environmental impediments to cooperative efficacy; and evaluating the contributions of these cooperatives to sustainable fisheries development. This investigation analyzes how fishery cooperatives act as institutional intermediaries to bolster economic resilience within the Somali coastal economy--a sector central to the National Transformation Plan, despite persistent regulatory fragmentation. Through semi-structured qualitative interviews with key informants--analyzed via reflexive thematic analysis and chi-square testing of age-cohort structure--the study finds that illegal, unreported, and unregulated fishing and inadequate post-harvest infrastructure are the principal constraints, whereas training, education, and community collaboration constitute the primary contributions. The results characterize these cooperatives as hybrid institutions that compensate for limited central-state capacity in remote coastal settlements while serving as intermediaries for the Federal Ministry of Fisheries and Blue Economy where co-management mandates are implemented. By extending the actor-community dimension of the SES framework to include age-cohort structure, this research demonstrates that clan-based reciprocal arrangements can serve as functional substitutes for Ostroms first design principle in contexts of persistent fragility. The study recommends multi-stakeholder partnerships to advance targeted capacity-building, financial literacy, and technological integration, and suggests future research into the post-harvest and retail sectors to examine the role of women in the Somali blue economy.